ethnicity gender race Tumor.Descriptor age_at_diagnosis Subgroup
03219313-c5f8-4722-9d02-8c85920a83c7 Not Hispanic or Latino Male White Initial CNS Tumor 3475 WNT
0483cc9e-4267-4d12-a090-e7e219e9f693 Not Hispanic or Latino Male White Recurrence 6033 G3
04a36966-1cd9-42d5-9092-e4c14ca0ffa2 Not Hispanic or Latino Male White Initial CNS Tumor 4044 G4
0505568d-4f63-4807-ba8d-d0daf235e2a7 Not Hispanic or Latino Male White Initial CNS Tumor 2907 G4
0f797471-8054-46fa-bb97-022aca350c16 Not Reported Male Reported Unknown Initial CNS Tumor 2511 G4
1277bdb6-e20c-4383-818b-d0ad6100280c Not Hispanic or Latino Female White Initial CNS Tumor 116 SHH
12ea67f5-e352-48dc-8150-00679c80d376 Not Reported Female Reported Unknown Initial CNS Tumor 1540 SHH
142fccd0-a038-452a-b7e9-e7a8841301b5 Not Hispanic or Latino Female White Initial CNS Tumor 2265 G3
14f481fc-18de-40b1-bb93-852035476cff Not Hispanic or Latino Male White Initial CNS Tumor 1694 G4
16857e2f-a4c7-41ef-8539-963359330c5f Not Hispanic or Latino Male White Progressive 1545 G3
16bd4555-5e9a-4b74-b9e8-2ea979a07941 Not Hispanic or Latino Male White Initial CNS Tumor 2327 G4
17475211-45a3-4c74-91bb-c1bcef71f8d6 Not Reported Male Reported Unknown Initial CNS Tumor 4406 WNT
18e09011-4a35-4e0d-80f8-10677ef4fdd6 Not Hispanic or Latino Female White Initial CNS Tumor 2066 G3
1918d0b0-f63c-4634-9234-ad528689caeb Not Reported Male Reported Unknown Initial CNS Tumor 475 SHH
1abce16c-b124-4504-a2bf-5491d6582595 Not Hispanic or Latino Male White Progressive 7398 G4
1b4a68bd-598c-42d6-891f-f3744afdbc7d Not Reported Female Reported Unknown Initial CNS Tumor 882 SHH
1ef7f947-f77b-42db-850f-1838b7e2aaa6 Not Hispanic or Latino Male White Initial CNS Tumor 4284 G3
2065961a-df02-4125-8420-83ec6e1c97a1 Not Reported Male Reported Unknown Initial CNS Tumor 2678 G4
23bb21ed-3f14-42f1-8666-e2da0f7912ca Hispanic or Latino Male Reported Unknown Initial CNS Tumor 4428 WNT
23f33354-1784-41be-a49c-9e9e165491c7 Not Hispanic or Latino Male White Initial CNS Tumor 2031 G3
29b6d60c-aef4-4cbb-b646-f1bd5510e348 Not Hispanic or Latino Male White Initial CNS Tumor 306 SHH
29c49c28-553a-476f-8f96-24f228841c7e Not Reported Female Reported Unknown Initial CNS Tumor 3712 G4
2ac97545-52bd-4bd8-9da3-908dd1229aae Not Hispanic or Latino Male Black or African American Initial CNS Tumor 4601 G4
32093eea-e295-441e-98c0-df0fa4cceb52 Not Hispanic or Latino Female Black or African American Initial CNS Tumor 2050 G4
32929c97-c39d-494a-bd5b-bfc51e43b07b Not Reported Male Reported Unknown Initial CNS Tumor 167 SHH
3630df6e-b046-41fc-9eb2-8479c1caf58e Not Hispanic or Latino Male White Initial CNS Tumor 5075 G4
36ba41f5-658b-4333-b04f-1298d81b69b7 Not Hispanic or Latino Male White Initial CNS Tumor 3266 G4
395d7651-b1ea-45f3-aee6-37e63f3fd98a Not Hispanic or Latino Male White Initial CNS Tumor 4526 WNT
3deb9b9c-fdbc-429c-b3a9-5258e34b88da Not Hispanic or Latino Female White Initial CNS Tumor 1032 G3
4037cd54-4789-4991-9752-5ea82bd2658d Not Hispanic or Latino Male White Initial CNS Tumor 3804 G4
40aac279-cad7-4f1e-8795-449c1f2b0c11 Not Hispanic or Latino Female White Initial CNS Tumor 2038 WNT
43522a66-ff59-4aff-9e61-10ba5d573755 Not Hispanic or Latino Male White Initial CNS Tumor 3542 G4
476db8dd-1167-4f61-be5e-bae42ef29363 Not Hispanic or Latino Male Black or African American Initial CNS Tumor 2644 G4
4b52281f-3ac7-4f1a-a8de-70e4282d3184 Not Reported Female Reported Unknown Unavailable 3336 G4
4c1d3243-a4dd-4c85-8d1c-2aee6434fa34 Hispanic or Latino Male Reported Unknown Initial CNS Tumor 2759 G4
501502d2-be5c-4763-b92e-b34672958d0d Not Hispanic or Latino Female White Initial CNS Tumor 3856 G4
54ce5dc3-a599-4e9f-939f-44ededf2518a Not Hispanic or Latino Male White Initial CNS Tumor 2696 WNT
55186584-798c-4ff2-8c9a-286f48328dba Not Hispanic or Latino Male White Initial CNS Tumor 4850 G4
5563c4c1-77fe-4fc3-b708-26f86e7ba9ba Not Hispanic or Latino Male Reported Unknown Initial CNS Tumor 3651 G4
5678440a-10c0-41f8-9282-8b1cae1d6550 Not Reported Male Black or African American Initial CNS Tumor 2857 WNT
57227244-b95c-4b3b-ac08-48e1c406c346 Not Hispanic or Latino Female White Initial CNS Tumor 2538 G4
58385abe-2b8b-4cd6-8adf-83f4b718f176 Not Reported Male Reported Unknown Progressive 1816 SHH
5afc9089-887d-4272-9299-83bd2ba2811d Hispanic or Latino Male Reported Unknown Initial CNS Tumor 5845 G3
5b355596-38a1-405c-be45-c9f6be1e936a Not Hispanic or Latino Male White Progressive 4021 SHH
5bd4475b-fe65-4961-8457-9d11e77bb1fe Not Hispanic or Latino Male White Progressive 486 SHH
5ca5741d-d0b2-4ab4-8fa8-5b81107e08e0 Not Reported Female Reported Unknown Unavailable 722 SHH
5ddc8087-d713-454a-a31d-64d8adde9554 Not Hispanic or Latino Female White Initial CNS Tumor 3408 G3
5f310e72-5798-4e8c-a815-bac2e2ca3ab5 Not Hispanic or Latino Female White Initial CNS Tumor 3606 G4
5fa5177e-f2a4-4f38-b894-87f094d7188d Hispanic or Latino Male Reported Unknown Initial CNS Tumor 526 WNT
605733db-91a5-4fe4-afea-bf41f738a8ad Not Hispanic or Latino Female White Initial CNS Tumor 3977 SHH
6260176f-a63b-47b1-9db5-90307064e732 Not Hispanic or Latino Female White Initial CNS Tumor 1484 G3
64e6bedf-bf1b-4a02-9ef1-5ff042ff7b4f Not Reported Female Reported Unknown Initial CNS Tumor 1076 SHH
6bbb1cf5-7ddd-4571-878e-95ea54657bdf NA NA NA Initial CNS Tumor 2059 G4
6cffe975-ddd9-4165-878b-965699055f24 Not Hispanic or Latino Male White Initial CNS Tumor 3655 G4
6d61d529-9352-4426-80b7-2c99236d8e10 Not Hispanic or Latino Female White Progressive 5041 SHH
6d6bdeea-1149-4cda-b8b8-1849386bfa26 Not Hispanic or Latino Male White Initial CNS Tumor 1067 G3
6e0dcc9b-00dc-42c3-8b94-d460b7e93aba Hispanic or Latino Male Reported Unknown Initial CNS Tumor 1663 G3
6e446e87-f51d-473f-a9bb-72bc543ecf28 Hispanic or Latino Male Reported Unknown Initial CNS Tumor 2590 G4
6e4cc2cb-cfec-453c-8090-fc0bb7276da0 Not Reported Male Reported Unknown Recurrence 2638 G3
730ccf77-d71e-4f8a-8d6e-f20d73b42853 Not Hispanic or Latino Female White Initial CNS Tumor 1475 SHH
7316-109_1 Not Hispanic or Latino Male White Initial CNS Tumor 4234 G4
7316-1460_1 Not Hispanic or Latino Male White Initial CNS Tumor 4389 G4
7316-14_1 Not Hispanic or Latino Male White Initial CNS Tumor 5027 G4
7316-1884_1 Not Reported Female White Progressive 5655 WNT
7316-219 Not Hispanic or Latino Female White Initial CNS Tumor 3722 WNT
7316-278 Not Hispanic or Latino Female White Initial CNS Tumor 5534 SHH
7316-302_1 Not Hispanic or Latino Female White Initial CNS Tumor 1384 G3
7316-333-RNA_398057 Not Hispanic or Latino Female White Progressive 6992 SHH
7316-968 Not Reported Female White Initial CNS Tumor 5612 WNT
7316_2009_RNA_470439 Not Hispanic or Latino Male White Initial CNS Tumor 5110 G4
79670dba-067b-4a5f-a647-ae7a9f1afa9b Not Hispanic or Latino Female White Initial CNS Tumor 754 G3
80dfccbc-6fec-4dde-a526-76bb06823c5f Not Reported Female Reported Unknown Initial CNS Tumor 4917 G4
8182a94d-5e11-4ad1-85f7-e2938be36cfd Not Hispanic or Latino Male White Initial CNS Tumor 5918 G4
81a1a552-1ea1-4e52-992a-af228d6e3aeb Not Hispanic or Latino Female White Progressive 6555 SHH
8589ec40-c070-4700-9085-bc498b8a7609 Not Reported Male Reported Unknown Initial CNS Tumor 880 G3
87b9c53a-de92-4aa4-9cfb-f34b226af9cd Not Hispanic or Latino Male White Initial CNS Tumor 604 SHH
89192ba7-0c55-4447-88f2-23b28826529e Not Hispanic or Latino Female White Initial CNS Tumor 1689 G3
8b9716c7-78e7-4273-88ff-917aade19384 Not Hispanic or Latino Male White Initial CNS Tumor 222 SHH
8bdbbea7-34b4-488a-9b53-575865de7da4 Not Hispanic or Latino Male White Initial CNS Tumor 4068 G3
90c12460-ff88-4f34-8ced-fe38c41afa01 Not Reported Male Reported Unknown Recurrence NA G4
9645ad33-86b5-4c68-ad7c-21ddd02956f6 Not Hispanic or Latino Male White Initial CNS Tumor 5119 G3
9acae27d-255b-4fde-9fbc-0ce8e9cb8457 Not Hispanic or Latino Male White Initial CNS Tumor 3424 G4
9bd4b260-5435-4fd0-905e-18f81441cc0f Not Hispanic or Latino Male White Initial CNS Tumor 3049 G3
9bdcbd69-2a89-4a41-b807-47c5c64936e4 Not Hispanic or Latino Female White Initial CNS Tumor 744 SHH
9dbfd49b-cbea-4ad7-85cc-b15aa15f0841 Not Hispanic or Latino Male White Initial CNS Tumor 13333 SHH
9f397017-10dc-414f-a8e7-8229d9109143 Not Hispanic or Latino Male White Initial CNS Tumor 4170 G3
a7ac8df0-0a0f-463d-bf9c-f0dc0b1699f5 Not Hispanic or Latino Male White Initial CNS Tumor 4058 G4
a8476f0b-3896-4dba-bc73-605878831df3 Not Reported Male White Initial CNS Tumor 1889 G3
aa1017f6-4db5-4613-80b3-97029e5237d5 Not Hispanic or Latino Female White Initial CNS Tumor 2994 WNT
ab9b45a3-88a2-425e-b9c4-27189b16837b Not Hispanic or Latino Male White Initial CNS Tumor 4854 G4
acb59dfa-3946-464e-a031-42bac7af62a0 Not Hispanic or Latino Male White Initial CNS Tumor 2320 G4
af93da9b-e566-475d-bf7e-e9b1f0c4a3fe Not Hispanic or Latino Female White Initial CNS Tumor 5666 G4
b73f775d-a72a-4527-bf01-aab685ca1f00 Not Hispanic or Latino Male White Initial CNS Tumor 3026 G4
bc22326a-e376-464c-a060-3c122db1c96e Not Hispanic or Latino Female More Than One Race Initial CNS Tumor 7628 SHH
bd671bee-332d-4975-9af9-019e6feb7db9 Not Hispanic or Latino Female Reported Unknown Initial CNS Tumor 3557 G4
bdede161-6576-434c-971e-e49db4bca8ce Not Hispanic or Latino Male White Initial CNS Tumor 1575 G3
beca10e7-79c7-4bb8-9649-700e3c967ab5 Not Reported Male Reported Unknown Initial CNS Tumor 3385 G4
c18130c5-ca43-4750-9519-79fa16f38fb4 Not Reported Male White Initial CNS Tumor 4869 G4
c2c1ab2a-f74c-46a5-9080-6d129efb85c4 Not Hispanic or Latino Male White Initial CNS Tumor 2859 G4
c346d256-c87d-49f9-9172-cb4e58a29c3c Not Hispanic or Latino Female White Initial CNS Tumor 1235 SHH
c3493fac-77ef-423e-a6e1-9b983f1a3bb1 Hispanic or Latino Female White Initial CNS Tumor 494 SHH
c5148949-815e-4453-8b72-e5869a1b7d64 Not Hispanic or Latino Male White Initial CNS Tumor 1846 WNT
c5d5924b-4902-41f9-907b-f8e4a4592a2d Not Reported Male Reported Unknown Unavailable 2513 WNT
c6469994-54bd-4774-a2f3-1dfd0e27fd21 Not Reported Female Reported Unknown Initial CNS Tumor 1433 G3
c733f0e2-839a-472a-8a0c-a0163cf56601 Not Hispanic or Latino Male White Initial CNS Tumor 4452 G4
cdcc9a75-ffbd-4e1c-be4a-f974f264b32d Hispanic or Latino Male Reported Unknown Initial CNS Tumor 3724 G3
cf4ef84e-5517-4841-8034-feaad22e25a0 Not Reported Male Reported Unknown Unavailable 1680 G4
d51b5528-af01-456f-b4df-ed8a97eb9815 Hispanic or Latino Male Reported Unknown Initial CNS Tumor 1385 G3
db6cbb2f-8dfe-4143-9db6-25e31288d3fa Not Hispanic or Latino Female White Recurrence 1875 G3
dfa66e6c-aa2c-4a35-b22f-c7b647dd34f4 Not Hispanic or Latino Male White Initial CNS Tumor 464 SHH
e2b898b6-026b-4904-86a5-9ea4e2d0eb05 Not Hispanic or Latino Male White Initial CNS Tumor 3332 SHH
e359f6e9-10ed-4d23-9962-745dc66d94ff Not Reported Female Reported Unknown Recurrence 1711 G3
ed5a9ca0-4d4c-404c-be52-40e7224c161e Not Hispanic or Latino Female Asian Initial CNS Tumor 4729 WNT
ee012563-6cc5-4a01-a493-5f38c9f0b750 Not Hispanic or Latino Male White Initial CNS Tumor 3503 G3
f3ebe588-e488-41d5-a6b4-c54073f72441 Not Hispanic or Latino Female White Initial CNS Tumor 2589 G4
f67e0900-3d2c-47eb-b2b5-0dd823f99e11 Not Hispanic or Latino Male White Initial CNS Tumor 5027 G4
fd992e2e-e4e0-4e36-b1cd-1e065e03bf55 Not Hispanic or Latino Male Reported Unknown Initial CNS Tumor 1514 SHH

This eSet contains 9598 probes/transcripts/genes in 117 samples, in which 6 sample class: ethnicity, gender, race, Tumor.Descriptor, age_at_diagnosis, Subgroup will used for basic clustering analysis.

Part I: Heatmap between samples

Distance between samples is calculated by dist2().

## Warning: Values in column annotation 'ethnicity' have a different order of names from the matrix column
## names. It may lead to wrong conclusion of your data. Please double check.
## Warning: Values in column annotation 'gender' have a different order of names from the matrix column names.
## It may lead to wrong conclusion of your data. Please double check.
## Warning: Values in column annotation 'race' have a different order of names from the matrix column names. It
## may lead to wrong conclusion of your data. Please double check.
## Warning: Values in column annotation 'Tumor.Descriptor' have a different order of names from the matrix
## column names. It may lead to wrong conclusion of your data. Please double check.
## Warning: Values in column annotation 'age_at_diagnosis' have a different order of names from the matrix
## column names. It may lead to wrong conclusion of your data. Please double check.
## Warning: Values in column annotation 'Subgroup' have a different order of names from the matrix column
## names. It may lead to wrong conclusion of your data. Please double check.

Part II: Dimension Reduction plot for samples

Original expression matrix is transformed and first two components/dimensions are visualized.

## No support for original clusters size larger than 6 (here age_at_diagnosis has 116 unique groups), please directly call draw.emb.kmeans() or draw.2D.interactive() for visualization!

Part III: Boxplot

The boxplot for the expression value in each sample is displayed with colored grouped by the sample class.

Part IV: Density plot

The density for the expression value in each sample is displayed with colored grouped by the sample class.

Part V: Correlation plot (pearson)

## Too many samples for drawing the correlation plot, will select the first 30 samples !
##             If want to specify the sample list, please choose the subset of eset as input !
## Too many samples for drawing the correlation plot, will select the first 30 samples !
##             If want to specify the sample list, please choose the subset of eset as input !

## Too many samples for drawing the correlation plot, will select the first 30 samples !
##             If want to specify the sample list, please choose the subset of eset as input !

## Too many samples for drawing the correlation plot, will select the first 30 samples !
##             If want to specify the sample list, please choose the subset of eset as input !

## Too many samples for drawing the correlation plot, will select the first 30 samples !
##             If want to specify the sample list, please choose the subset of eset as input !

## Too many samples for drawing the correlation plot, will select the first 30 samples !
##             If want to specify the sample list, please choose the subset of eset as input !

Part VI: MeanSd Plot

## No selection for MeanSd plot!